.jpg?width=300&name=API-2%20(1).jpg)
APIs and Integration Services
Workflows and processes engineered for compliance, provenance, and speed
.jpg?width=1001&height=666&name=Service-Overview%20(3).jpg)
Service Overview
Automation and APIs promise scalable, interoperable genomics and lab operations, driven by rapid FHIR adoption and surging lab-automation investment. However, integration complexity, skills shortages, and lengthy implementations slow adoption. Regulators now demand lineage, privacy, and reproducibility across pipelines.
ClairLabs delivers API-first LIMS/instrument integration, omics workflows, governed ETL, automated QC, and lineage pipelines. Effortlessly produce AI-ready, audit-grade datasets for diagnostics, biopharma, and clinical research.
APIs and Integration Offerings

We provide Cloud-native Nextflow/WDL orchestration for scalable, reproducible FASTQ-to-VCF workflows. Reduce time-to-result while maintaining traceable lineage and regulatory compliance with our automation and API services.

Robust RESTful APIs integrate LIMS, ELN, and laboratory instruments, automating the capture of assay metadata, tracking the sample lifecycle, and ensuring contextual provenance to ensure operational traceability and regulatory-grade auditability.

Secure, configurable ingestion pipelines (SFTP, cloud, APIs) automate validation, de-duplication, schema harmonization, and metadata enrichment, producing governed, AI-ready data lakes with end-to-end lineage and access controls.

End-to-end automated QC and validation pipelines run statistical assessments, sensitivity/specificity benchmarking, batch-aware controls, and report generation—providing reproducible metrics, audit trails, and evidence for regulatory submissions.

Governed data APIs and a secure marketplace enable self-service discovery, fine-grained access controls, usage auditing, and monetization—accelerating collaborations while preserving privacy, provenance, and commercial compliance.
Why ClairLabs
Compliant, reproducible automation design for NGS and lab workflows aimed at reducing turn-around times while preserving auditability, lineage, and clinical-grade data integrity across cloud or hybrid deployments.
RESTful APIs that unify LIMS, ELN, and instruments, enabling real-time metadata capture, automated sample tracking, and operational transparency, resulting in assay throughput while ensuring regulatory traceability and provenance.
Reproducible sensitivity/specificity metrics, batch-aware controls, and regulatory-ready audit trails that streamline assay qualification, reducing review cycles and de-risking clinical deployments globally.
Digital spaces with governed data APIs having fine-grained access, usage auditing, and monetization, that facilitate collaborations while preserving privacy, provenance, and commercial compliance.
Related Solutions
Related Solutions
.jpg?width=300&name=048fe5e71d05e92b27c3f32758269d2404fe5aff%20(1).jpg)
Deploy containerized NGS workflows on cloud-native infrastructure. Automate variant calling, annotation, and reporting for high-throughput genomic diagnostics and research.
.jpg?width=300&name=048fe5e71d05e92b27c3f32758269d2404fe5aff%20(1).jpg)
Deploy containerized NGS workflows on cloud-native infrastructure. Automate variant calling, annotation, and reporting for high-throughput genomic diagnostics and research.
.jpg?width=300&name=048fe5e71d05e92b27c3f32758269d2404fe5aff%20(1).jpg)
Deploy containerized NGS workflows on cloud-native infrastructure. Automate variant calling, annotation, and reporting for high-throughput genomic diagnostics and research.

Go from sample to insight, with seamless and scalable automation.